Version 5.4
Homo sapiens Gene: LRRC4C
Summary
InnateDB Gene IDBG-40253.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LRRC4C
Gene Name leucine rich repeat containing 4C
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000148948
Encoded Proteins
IDBP-40255
leucine rich repeat containing 4C
IDBP-589387
leucine rich repeat containing 4C
IDBP-598447
leucine rich repeat containing 4C
IDBP-594526
leucine rich repeat containing 4C
IDBP-592119
leucine rich repeat containing 4C
IDBP-808043
leucine rich repeat containing 4C
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary NGL1 is a specific binding partner for netrin G1 (NTNG1; MIM 608818), which is a member of the netrin family of axon guidance molecules (Lin et al., 2003 [PubMed 14595443]).[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 11:40114203-41459773
Strand Reverse strand
Band p12
Transcripts
ENST00000278198 ENSP00000278198
ENST00000527150 ENSP00000436976
ENST00000528697 ENSP00000437132
ENST00000530763 ENSP00000434761
ENST00000533474 ENSP00000431363
ENST00000534577
ENST00000619527 ENSP00000480903
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 4 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0050770 regulation of axonogenesis
Cellular Component
GO:0005615 extracellular space
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0030054 cell junction
GO:0045211 postsynaptic membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000050587
View Gene Order
ENSBTAG00000007324
Not yet available
Pathways
NETPATH
REACTOME
KEGG
hsa04514
Cell adhesion molecules (CAMs) pathway
hsa04360
Axon guidance pathway
INOH
PID NCI
Cross-References
SwissProt Q9HCJ2
TrEMBL E9PLP4
UniProt Splice Variant
Entrez Gene 57689
UniGene Hs.135736 Hs.741547
RefSeq NM_001258419 NM_020929
HUGO HGNC:29317
OMIM 608817
CCDS CCDS31464
HPRD 12303
IMGT
EMBL AB046800 AC013488 AC016845 AC018951 AC021824 AC023943 AC025069 AC080100 AC090138 AC090720 AC104235 AC104387 AC116015 AK289646 AY358293 BC041374 CH471064
GenPept AAH41374 AAQ88660 BAB13406 BAF82335 EAW68107
RNA Seq Atlas 57689

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca