Version 5.4
Homo sapiens Gene: PDZRN3
Summary
InnateDB Gene IDBG-45040.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PDZRN3
Gene Name PDZ domain containing ring finger 3
Synonyms LNX3; SEMACAP3
Species Homo sapiens
Ensembl Gene ENSG00000121440
Encoded Proteins
IDBP-45042
PDZ domain containing ring finger 3
IDBP-45046
PDZ domain containing ring finger 3
IDBP-484719
PDZ domain containing ring finger 3
IDBP-484527
PDZ domain containing ring finger 3
IDBP-474214
PDZ domain containing ring finger 3
IDBP-484356
PDZ domain containing ring finger 3
IDBP-484822
PDZ domain containing ring finger 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 3:73382433-73624940
Strand Reverse strand
Band p13
Transcripts
ENST00000263666 ENSP00000263666
ENST00000308537 ENSP00000308831
ENST00000494559 ENSP00000419095
ENST00000462146 ENSP00000418168
ENST00000466780 ENSP00000418484
ENST00000479530 ENSP00000418624
ENST00000492909 ENSP00000419250
ENST00000478209
ENST00000466348
ENST00000484487
ENST00000477434
ENST00000498048
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
Experimentally validated
Total 4 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0004842 ubiquitin-protein transferase activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0016874 ligase activity
GO:0046872 metal ion binding
Biological Process
GO:0007528 neuromuscular junction development
GO:0016567 protein ubiquitination
Cellular Component
GO:0031594 neuromuscular junction
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000035357
View Gene Order
ENSBTAG00000018644
Not yet available
Cross-References
SwissProt
TrEMBL E7ENB6
UniProt Splice Variant
Entrez Gene 23024
UniGene Hs.434900
RefSeq NM_015009 XM_005264718
HUGO HGNC:17704
OMIM 609729
CCDS CCDS33789
HPRD 15115
IMGT
EMBL AC024102 AC103560 AC117489 AC119731
GenPept
RNA Seq Atlas 23024

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca