Version 5.4
Homo sapiens Gene: U2AF1L4
Summary
InnateDB Gene IDBG-45152.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol U2AF1L4
Gene Name U2 small nuclear RNA auxiliary factor 1-like 4
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000161265
Encoded Proteins
IDBP-45154
U2 small nuclear RNA auxiliary factor 1-like 4
IDBP-45156
U2 small nuclear RNA auxiliary factor 1-like 4
IDBP-378282
U2 small nuclear RNA auxiliary factor 1-like 4
IDBP-761473
IDBP-808193
U2 small nuclear RNA auxiliary factor 1-like 4
IDBP-759705
IDBP-765605
IDBP-808191
U2 small nuclear RNA auxiliary factor 1-like 4
IDBP-808194
U2 small nuclear RNA auxiliary factor 1-like 4
IDBP-763931
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 19:35742464-35745445
Strand Reverse strand
Band q13.12
Transcripts
ENST00000378975 ENSP00000368258
ENST00000292879 ENSP00000292879
ENST00000412391 ENSP00000397645
ENST00000585771
ENST00000601236 ENSP00000469891
ENST00000588100
ENST00000600296 ENSP00000474493
ENST00000594792 ENSP00000471804
ENST00000587886 ENSP00000467441
ENST00000591084 ENSP00000475046
ENST00000585554
ENST00000590135
ENST00000591855
ENST00000589429 ENSP00000473940
ENST00000586476
ENST00000592913
ENST00000590650
ENST00000588892
ENST00000588980
ENST00000587987 ENSP00000465170
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0005634 nucleus
GO:0005681 spliceosomal complex
GO:0016607 nuclear speck
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000078765
View Gene Order
ENSBTAG00000023610
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.351558
RefSeq NM_001040425 NM_144987
HUGO
OMIM
CCDS CCDS12473 CCDS42551
HPRD 03050
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca