Version 5.4
Homo sapiens Gene: RRP1
Summary
InnateDB Gene IDBG-4897.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RRP1
Gene Name ribosomal RNA processing 1 homolog (S. cerevisiae)
Synonyms D21S2056E; NNP-1; NOP52; RRP1A
Species Homo sapiens
Ensembl Gene ENSG00000160214
Encoded Proteins
IDBP-478580
ribosomal RNA processing 1 homolog (S. cerevisiae)
IDBP-485421
ribosomal RNA processing 1 homolog (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary The protein encoded by this gene is the putative homolog of the yeast ribosomal RNA processing protein RRP1. The encoded protein is involved in the late stages of nucleologenesis at the end of mitosis, and may be required for the generation of 28S rRNA. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 21:43789513-43805293
Strand Forward strand
Band q22.3
Transcripts
ENST00000497547 ENSP00000417464
ENST00000475534
ENST00000483896 ENSP00000426898
ENST00000492638
ENST00000473988
ENST00000467112
ENST00000471909
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006364 rRNA processing
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0030688 preribosome, small subunit precursor
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000061032
View Gene Order
ENSBTAG00000003981
Not yet available
Cross-References
SwissProt P56182
TrEMBL D6RE82
UniProt Splice Variant
Entrez Gene 8568
UniGene Hs.110757
RefSeq NM_003683
HUGO HGNC:18785
OMIM 610653
CCDS CCDS42951
HPRD
IMGT
EMBL AL137757 AP001053 AP001752 BC000380 U79775
GenPept AAC51625 AAH00380 BAA95542 CAB70909
RNA Seq Atlas 8568

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca