Version 5.4
Homo sapiens Gene: LIN7A
Summary
InnateDB Gene IDBG-49666.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LIN7A
Gene Name lin-7 homolog A (C. elegans)
Synonyms LIN-7A; LIN7; MALS-1; TIP-33; VELI1
Species Homo sapiens
Ensembl Gene ENSG00000111052
Encoded Proteins
IDBP-49668
lin-7 homolog A (C. elegans)
IDBP-603355
lin-7 homolog A (C. elegans)
IDBP-593540
lin-7 homolog A (C. elegans)
IDBP-600930
lin-7 homolog A (C. elegans)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 12:80792520-80937925
Strand Reverse strand
Band q21.31
Transcripts
ENST00000261203 ENSP00000261203
ENST00000552864 ENSP00000447488
ENST00000549417 ENSP00000448975
ENST00000552093 ENSP00000448891
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 17 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 17 [view]
Protein-Protein 17 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0030165 PDZ domain binding
GO:0097016 L27 domain binding
Biological Process
GO:0006461 protein complex assembly
GO:0006887 exocytosis
GO:0007269 neurotransmitter secretion
GO:0015031 protein transport
GO:0048489 synaptic vesicle transport
GO:0048839 inner ear development
Cellular Component
GO:0005923 tight junction
GO:0014069 postsynaptic density
GO:0016020 membrane
GO:0016323 basolateral plasma membrane
GO:0043005 neuron projection
GO:0045202 synapse
GO:0045211 postsynaptic membrane
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000019906
View Gene Order
ENSBTAG00000011367
Not yet available
Pathways
NETPATH
REACTOME
KEGG
INOH
PID NCI
Cross-References
SwissProt O14910
TrEMBL
UniProt Splice Variant
Entrez Gene 8825
UniGene Hs.586760 Hs.624171 Hs.630298
RefSeq NM_004664 XM_005269212
HUGO HGNC:17787
OMIM 603380
CCDS CCDS9021
HPRD 04542
IMGT
EMBL AF028826 AF087693 AF173081 AK315321 BC099921 BC118609 BC122561 CR407680
GenPept AAB84251 AAC78481 AAD48500 AAH99921 AAI18610 AAI22562 BAG37724 CAG28608
RNA Seq Atlas 8825

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca