Version 5.4
Homo sapiens Gene: GPCPD1
Summary
InnateDB Gene IDBG-51597.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol GPCPD1
Gene Name glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000125772
Encoded Proteins
IDBP-51599
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
IDBP-365231
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 20:5544439-5611026
Strand Reverse strand
Band p12.3
Transcripts
ENST00000379019 ENSP00000368305
ENST00000418646 ENSP00000396720
ENST00000481038
ENST00000462080
ENST00000473797
ENST00000481690
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0008081 phosphoric diester hydrolase activity
GO:0008889 glycerophosphodiester phosphodiesterase activity
GO:0030246 carbohydrate binding
GO:0047389 glycerophosphocholine phosphodiesterase activity
GO:2001070 starch binding
Biological Process
GO:0006071 glycerol metabolic process
GO:0006629 lipid metabolic process
GO:0006644 phospholipid metabolic process
GO:0044281 small molecule metabolic process
GO:0046474 glycerophospholipid biosynthetic process
Cellular Component
GO:0005829 cytosol
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000027346
View Gene Order
ENSBTAG00000008293
Not yet available
Pathways
NETPATH
REACTOME
REACT_120785
Hydrolysis of LPE pathway
REACT_120977
Hydrolysis of LPC pathway
REACT_22258
Metabolism of lipids and lipoproteins pathway
REACT_121401
Glycerophospholipid biosynthesis pathway
REACT_120870
Phospholipid metabolism pathway
REACT_111217
Metabolism pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.605472 Hs.636359 Hs.713997
RefSeq NM_019593 XM_005260758 XM_005260760 XM_005260761 XM_006723595 XM_006723596
HUGO
OMIM
CCDS CCDS13090
HPRD 10025
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca