Version 5.4
Bos taurus Gene: BT.62842
Summary
InnateDB Gene IDBG-629140.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol BT.62842
Gene Name superkiller viralicidic activity 2-like 2
Synonyms SKIV2L2
Species Bos taurus
Ensembl Gene ENSBTAG00000010518
Encoded Proteins
IDBP-680631
superkiller viralicidic activity 2-like 2
IDBP-680633
superkiller viralicidic activity 2-like 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000039123:
Gene Information
Type Protein coding
Genomic Location Chromosome 20:23727322-23853276
Strand Reverse strand
Band
Transcripts
ENSBTAT00000047363 ENSBTAP00000044575
ENSBTAT00000064767 ENSBTAP00000054630
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 32 interaction(s) predicted by orthology.
Predicted by orthology
Total 32 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0004386 helicase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0016817 hydrolase activity, acting on acid anhydrides
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0044822 poly(A) RNA binding
Biological Process
GO:0000460 maturation of 5.8S rRNA
GO:0008152 metabolic process
Cellular Component
GO:0000178 exosome (RNase complex)
GO:0005634 nucleus
GO:0071013 catalytic step 2 spliceosome
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000039123
View Gene Order
ENSMUSG00000016018
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa03018
RNA degradation pathway
mmu03018
RNA degradation pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL G3MYJ7
UniProt Splice Variant
Entrez Gene 520256
UniGene Bt.62842
RefSeq NM_001099012
HUGO HGNC:18734
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02050343 DAAA02050344 DAAA02050345 DAAA02050346
GenPept
RNA Seq Atlas 520256

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca