Version 5.4
Bos taurus Gene: SLIT1
Summary
InnateDB Gene IDBG-638136.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SLIT1
Gene Name Uncharacterized protein
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000043991
Encoded Proteins
IDBP-690242
slit homolog 1 (Drosophila)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000187122:
Gene Information
Type Protein coding
Genomic Location Chromosome 26:18136427-18196310
Strand Reverse strand
Band
Transcripts
ENSBTAT00000061296 ENSBTAP00000053488
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
GO:0048495 Roundabout binding
Biological Process
GO:0007409 axonogenesis
GO:0007411 axon guidance
GO:0008045 motor neuron axon guidance
GO:0021772 olfactory bulb development
GO:0022028 tangential migration from the subventricular zone to the olfactory bulb
GO:0022029 telencephalon cell migration
GO:0031290 retinal ganglion cell axon guidance
GO:0033563 dorsal/ventral axon guidance
GO:0040023 establishment of nucleus localization
GO:0048812 neuron projection morphogenesis
GO:0048846 axon extension involved in axon guidance
GO:0050919 negative chemotaxis
Cellular Component
GO:0005615 extracellular space
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000187122
View Gene Order
ENSMUSG00000025020
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_22237
Netrin-1 signaling pathway
REACT_111045
Developmental Biology pathway
REACT_18266
Axon guidance pathway
REACT_229826
Netrin-1 signaling pathway
REACT_261444
Axon guidance pathway
REACT_188576
Developmental Biology pathway
KEGG
hsa04360
Axon guidance pathway
mmu04360
Axon guidance pathway
INOH
PID NCI
ajdiss_2pathway
Posttranslational regulation of adherens junction stability and dissassembly
Cross-References
SwissProt
TrEMBL E1BP10
UniProt Splice Variant
Entrez Gene 510761
UniGene Bt.109722 Bt.76230 Bt.96730
RefSeq XM_002698413
HUGO HGNC:11085
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02058910
GenPept
RNA Seq Atlas 510761
Transcript Frequencies
Tag Count based mRNA-Abundances across 87 different Tissues (TPM).

Based on Data from Bovine Gene Atlas

Tag Count based mRNA-Abundances across 87 different Tissues (TPM)

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If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca