Bos taurus Gene: SALL4
Summary
InnateDB Gene IDBG-643277.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SALL4
Gene Name sal-like protein 4
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000003101
Encoded Proteins
sal-like 4 (Drosophila)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000101115:
The protein encoded by this gene may be a zinc finger transcription factor. Defects in this gene are a cause of Duane-radial ray syndrome (DRRS). [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 13:80297262-80313158
Strand Reverse strand
Band
Transcripts
ENSBTAT00000004035 ENSBTAP00000004035
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 50 interaction(s) predicted by orthology.
Predicted by orthology
Total 50 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0001701 in utero embryonic development
GO:0001833 inner cell mass cell proliferation
GO:0001843 neural tube closure
GO:0003281 ventricular septum development
GO:0007507 heart development
GO:0009888 tissue development
GO:0019827 stem cell maintenance
GO:0021915 neural tube development
GO:0030326 embryonic limb morphogenesis
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0000792 heterochromatin
GO:0005634 nucleus
GO:0043234 protein complex
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
Method
Confidence
Comments
SSD Ortholog
Ortholog supports species divergence
SSD Ortholog
Ortholog supports species divergence
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
Developmental Biology pathway
Transcriptional regulation of pluripotent stem cells pathway
Transcriptional regulation of pluripotent stem cells pathway
Developmental Biology pathway
KEGG
INOH
PID BIOCARTA
PID NCI
Regulation of nuclear beta catenin signaling and target gene transcription
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Bt.8493
RefSeq NM_001192836 XM_005214828
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas
Transcript Frequencies
Tag Count based mRNA-Abundances across 87 different Tissues (TPM).

Based on Data from Bovine Gene Atlas

Tag Count based mRNA-Abundances across 87 different Tissues (TPM)

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