Mus musculus Gene: Sall4
Summary
InnateDB Gene IDBG-213166.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Sall4
Gene Name sal-like 4 (Drosophila)
Synonyms 5730441M18Rik; AA407717; AL022809; AW536104; C330011P20Rik; C78083; C78563; Tex20;
Species Mus musculus
Ensembl Gene ENSMUSG00000027547
Encoded Proteins
sal-like 4 (Drosophila)
sal-like 4 (Drosophila)
sal-like 4 (Drosophila)
sal-like 4 (Drosophila)
sal-like 4 (Drosophila)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000101115:
The protein encoded by this gene may be a zinc finger transcription factor. Defects in this gene are a cause of Duane-radial ray syndrome (DRRS). [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:168748332-168767943
Strand Reverse strand
Band H3
Transcripts
ENSMUST00000103074 ENSMUSP00000099363
ENSMUST00000029061 ENSMUSP00000029061
ENSMUST00000075044 ENSMUSP00000074556
ENSMUST00000150588 ENSMUSP00000119628
ENSMUST00000137536 ENSMUSP00000115646
ENSMUST00000125138
ENSMUST00000130640
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 63 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.
Experimentally validated
Total 63 [view]
Protein-Protein 62 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 5 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0001701 in utero embryonic development
GO:0001833 inner cell mass cell proliferation
GO:0001843 neural tube closure
GO:0003281 ventricular septum development
GO:0006351 transcription, DNA-templated
GO:0007507 heart development
GO:0009888 tissue development
GO:0019827 stem cell maintenance
GO:0021915 neural tube development
GO:0030326 embryonic limb morphogenesis
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0000792 heterochromatin
GO:0005634 nucleus
GO:0005667 transcription factor complex
GO:0005737 cytoplasm
GO:0043234 protein complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
SSD Ortholog
Ortholog supports species divergence
Not yet available
SSD Ortholog
Ortholog supports species divergence
Pathways
NETPATH
REACTOME
Transcriptional regulation of pluripotent stem cells pathway
Developmental Biology pathway
KEGG
INOH
PID BIOCARTA
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
Developmental Biology pathway
Transcriptional regulation of pluripotent stem cells pathway
KEGG
INOH
PID BIOCARTA
PID NCI
Regulation of nuclear beta catenin signaling and target gene transcription
Cross-References
SwissProt Q8BX22
TrEMBL A2AUZ6 A2AUZ7
UniProt Splice Variant
Entrez Gene 99377
UniGene Mm.434054 Mm.490784
RefSeq NM_175303 NM_201395 NM_201396 XM_006500486
OMIM
CCDS CCDS17115 CCDS17116 CCDS17117
HPRD
IMGT
MGI ID MGI:2139360
MGI Symbol Sall4
EMBL AJ488904 AK049188 AL929248 AY463371 AY463372 AY463373 CH466551
GenPept AAR91796 AAR91797 AAR91798 BAC33598 CAD32912 CAM21964 EDL06559
RNA Seq Atlas 99377