Version 5.4
Homo sapiens Gene: TRIM47
Summary
InnateDB Gene IDBG-69064.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TRIM47
Gene Name tripartite motif containing 47
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000132481
Encoded Proteins
IDBP-69066
tripartite motif containing 47
IDBP-763423
IDBP-762097
IDBP-764028
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
InnateDB Annotation
Summary
PMID 23438823
TRIM47 was identified in a systematic screen for positive regulators of innate immune responses.
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 17:75874161-75878575
Strand Reverse strand
Band q25.1
Transcripts
ENST00000254816 ENSP00000254816
ENST00000587339 ENSP00000465010
ENST00000585333 ENSP00000467645
ENST00000586495 ENSP00000465038
ENST00000593089
ENST00000592942
ENST00000587774
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 16 experimentally validated interaction(s) in this database.
Experimentally validated
Total 16 [view]
Protein-Protein 16 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0045087 innate immune response (InnateDB)
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000020773
View Gene Order
ENSBTAG00000018920
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.293660
RefSeq NM_033452 XM_005257787 XM_005257788
HUGO
OMIM
CCDS CCDS32737
HPRD 15564
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca