Version 5.4
Homo sapiens Gene: SSC5D
Summary
InnateDB Gene IDBG-70810.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SSC5D
Gene Name scavenger receptor cysteine rich domain containing (5 domains)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000179954
Encoded Proteins
IDBP-70814
scavenger receptor cysteine rich domain containing (5 domains)
IDBP-764778
IDBP-764312
IDBP-760768
IDBP-810147
scavenger receptor cysteine rich family, 5 domains
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 19:55488404-55519098
Strand Forward strand
Band q13.42
Transcripts
ENST00000389623 ENSP00000374274
ENST00000589020 ENSP00000467434
ENST00000594321 ENSP00000470226
ENST00000587166 ENSP00000467252
ENST00000588254
ENST00000615233 ENSP00000478419
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0001968 fibronectin binding
GO:0005044 scavenger receptor activity
GO:0005515 protein binding
GO:0043236 laminin binding
GO:0050840 extracellular matrix binding
Biological Process
GO:0006898 receptor-mediated endocytosis
GO:0006952 defense response
GO:0007275 multicellular organismal development
GO:0042494 detection of bacterial lipoprotein
GO:0045087 innate immune response
GO:0050829 defense response to Gram-negative bacterium
GO:0050830 defense response to Gram-positive bacterium
GO:2000482 regulation of interleukin-8 secretion
GO:2000483 negative regulation of interleukin-8 secretion
Cellular Component
GO:0005615 extracellular space
GO:0005622 intracellular
GO:0005737 cytoplasm
GO:0016020 membrane
GO:0031012 extracellular matrix
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000035279
View Gene Order
ENSBTAG00000030885
Not yet available
Cross-References
SwissProt
TrEMBL K7EPL3
UniProt Splice Variant
Entrez Gene 284297
UniGene Hs.554182
RefSeq NM_001144950 NM_001195267
HUGO HGNC:26641
OMIM
CCDS CCDS46196 CCDS59424
HPRD 11444
IMGT
EMBL AC008735
GenPept
RNA Seq Atlas 284297

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca