Version 5.4
Homo sapiens Gene: JMJD1C
Summary
InnateDB Gene IDBG-75649.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol JMJD1C
Gene Name jumonji domain containing 1C
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000171988
Encoded Proteins
IDBP-75651
jumonji domain containing 1C
IDBP-231011
jumonji domain containing 1C
IDBP-585808
jumonji domain containing 1C
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 10:63167221-63465881
Strand Reverse strand
Band q21.3
Transcripts
ENST00000327520 ENSP00000335929
ENST00000399262 ENSP00000382204
ENST00000402544
ENST00000467356
ENST00000497922
ENST00000490669
ENST00000483298
ENST00000469152
ENST00000489372
ENST00000542921 ENSP00000444682
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 21 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 21 [view]
Protein-Protein 21 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0046872 metal ion binding
GO:0046966 thyroid hormone receptor binding
GO:0051213 dioxygenase activity
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0007596 blood coagulation
GO:0016568 chromatin modification
GO:0055114 oxidation-reduction process
Cellular Component
GO:0005622 intracellular
GO:0005654 nucleoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000037876
View Gene Order
ENSBTAG00000001573
Not yet available
Pathways
NETPATH
REACTOME
REACT_24970
Factors involved in megakaryocyte development and platelet production pathway
REACT_604
Hemostasis pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt Q15652
TrEMBL
UniProt Splice Variant
Entrez Gene 221037
UniGene Hs.413416 Hs.592714
RefSeq NM_032776 XM_005269622 XM_005269624 XM_005269627 NM_001282948 XM_005269626 XM_006717707
HUGO HGNC:12313
OMIM 604503
CCDS CCDS41532 CCDS60538
HPRD 05141
IMGT
EMBL AB037801 AC022022 AK027280 AL590502 AL607128 AL713895 AL831917 BX537954 EF068222 L40411
GenPept AAC41741 ABK64187 BAA92618 CAD38578 CAD97921 CAI10947 CAI10948 CAI10950 CAI14188
RNA Seq Atlas 221037

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca