Version 5.4
Homo sapiens Gene: IKBKAP
Summary
InnateDB Gene IDBG-79889.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol IKBKAP
Gene Name inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
Synonyms DYS; ELP1; FD; IKAP; IKI3; TOT1
Species Homo sapiens
Ensembl Gene ENSG00000070061
Encoded Proteins
IDBP-79891
inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
IDBP-603043
inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
IDBP-597903
inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary The protein encoded by this gene is a scaffold protein and a regulator for 3 different kinases involved in proinflammatory signaling. This encoded protein can bind NF-kappa-B-inducing kinase (NIK) and IKKs through separate domains and assemble them into an active kinase complex. Mutations in this gene have been associated with familial dysautonomia. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 9:108867517-108934116
Strand Reverse strand
Band q31.3
Transcripts
ENST00000374647 ENSP00000363779
ENST00000495759 ENSP00000433514
ENST00000467959
ENST00000537196 ENSP00000439367
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 95 experimentally validated interaction(s) in this database.
Experimentally validated
Total 95 [view]
Protein-Protein 94 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0004871 signal transducer activity
GO:0005488 binding
GO:0005515 protein binding
GO:0008607 phosphorylase kinase regulator activity
Biological Process
GO:0006325 chromatin organization
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0006368 transcription elongation from RNA polymerase II promoter
GO:0006461 protein complex assembly
GO:0006468 protein phosphorylation
GO:0006955 immune response
GO:0007165 signal transduction
GO:0030335 positive regulation of cell migration
GO:0045859 regulation of protein kinase activity
Cellular Component
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0008023 transcription elongation factor complex
GO:0016591 DNA-directed RNA polymerase II, holoenzyme
GO:0033588 Elongator holoenzyme complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000028431
View Gene Order
ENSBTAG00000004991
Not yet available
Pathways
NETPATH
NetPath_9
TNFalpha pathway
NetPath_13
IL1 pathway
REACTOME
REACT_172610
HATs acetylate histones pathway
REACT_172623
Chromatin organization pathway
REACT_172633
Chromatin modifying enzymes pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.494738 Hs.595702
RefSeq NM_003640 XM_005252285
HUGO
OMIM
CCDS CCDS6773
HPRD 04763
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca