Version 5.4
Homo sapiens Gene: SRSF12
Summary
InnateDB Gene IDBG-94284.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SRSF12
Gene Name serine/arginine-rich splicing factor 12
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000154548
Encoded Proteins
IDBP-385226
serine/arginine-rich splicing factor 12
IDBP-478409
serine/arginine-rich splicing factor 12
IDBP-483967
serine/arginine-rich splicing factor 12
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 6:89095959-89118081
Strand Reverse strand
Band q15
Transcripts
ENST00000452027 ENSP00000414302
ENST00000524221
ENST00000488604
ENST00000475068 ENSP00000430513
ENST00000517387 ENSP00000427982
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
Experimentally validated
Total 8 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0044822 poly(A) RNA binding
GO:0050733 RS domain binding
GO:0051082 unfolded protein binding
Biological Process
GO:0000244 spliceosomal tri-snRNP complex assembly
GO:0000381 regulation of alternative mRNA splicing, via spliceosome
GO:0000395 mRNA 5'-splice site recognition
GO:0016482 cytoplasmic transport
GO:0048025 negative regulation of mRNA splicing, via spliceosome
Cellular Component
GO:0005654 nucleoplasm
Orthologs
No orthologs found for this gene
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.254414 Hs.638264
RefSeq NM_080743 XM_006715348
HUGO
OMIM
CCDS CCDS47459
HPRD 11605
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca