InnateDB Protein
|
IDBP-156140.6
|
Last Modified
|
2014-10-13 [Report errors or provide feedback]
|
Gene Symbol
|
Pdlim7
|
Protein Name
|
PDZ and LIM domain 7
|
Synonyms
|
LMP;
|
Species
|
Mus musculus
|
Ensembl Protein
|
ENSMUSP00000064219
|
InnateDB Gene
|
IDBG-156136 (Pdlim7)
|
Protein Structure
|
|
Function |
May function as a scaffold on which the coordinated assembly of proteins can occur. May play a role as an adapter that, via its PDZ domain, localizes LIM-binding proteins to actin filaments of both skeletal muscle and nonmuscle tissues. Involved in both of the two fundamental mechanisms of bone formation, direct bone formation (e.g. embryonic flat bones mandible and cranium), and endochondral bone formation (e.g. embryonic long bone development). Plays a role during fracture repair. Involved in BMP6 signaling pathway (By similarity). {ECO:0000250}.
|
Subcellular Localization |
Cytoplasm {ECO:0000250}. Cytoplasm, cytoskeleton {ECO:0000250}. Note=Colocalizes with RET to the cell periphery and in some cytoskeletal components. Colocalizes with TPM2 near the Z line in muscle. Colocalizes with TBX4 and TBX5 to actin filaments (By similarity). {ECO:0000250}.
|
Disease Associations |
|
Tissue Specificity |
|
Comments |
|
Number of Interactions
|
This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 32 interaction(s) predicted by orthology.
Experimentally validated |
Total |
3
[view]
|
Protein-Protein |
3
[view]
|
Protein-DNA |
0
|
Protein-RNA |
0
|
DNA-DNA |
0
|
RNA-RNA |
0
|
DNA-RNA |
0
|
|
Predicted by orthology |
Total |
32 [view]
|
|
|
Molecular Function |
|
Biological Process |
|
Cellular Component |
|
PDB ID |
MGI:1914649
|
InterPro |
IPR001478
PDZ domain
|
PFAM |
PF00595
PF13180
|
PRINTS |
|
PIRSF |
|
SMART |
SM00228
|
TIGRFAMs |
|
Modification |
|
SwissProt |
Q3TJD7
|
PhosphoSite |
PhosphoSite-Q3TJD7
|
TrEMBL |
B8JJB1
|
UniProt Splice Variant |
|
Entrez Gene |
67399
|
UniGene |
|
RefSeq |
NP_080407
|
MGI ID |
|
MGI Symbol |
Pdlim7
|
OMIM |
|
CCDS |
CCDS26547
|
HPRD |
|
IMGT |
|
EMBL |
AK003019
AK003338
AK010141
AK167476
BC045528
BC049565
CT009762
|
GenPept |
AAH45528
AAH49565
BAB22725
BAB26726
BAC25017
BAE39558
|
|
|