InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Csde1

Summary

InnateDB Protein

IDBP-180857.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Csde1

Protein Name

cold shock domain containing E1, RNA binding

Synonyms

Species

Mus musculus

Ensembl Protein

ENSMUSP00000029446

InnateDB Gene

IDBG-180853 (Csde1)

Protein Structure

UniProt Annotation

Function

RNA-binding protein. May be involved in translationally coupled mRNA turnover. Implicated with other RNA-binding proteins in the cytoplasmic deadenylation/translational and decay interplay of the FOS mRNA mediated by the major coding-region determinant of instability (mCRD) domain (By similarity). {ECO:0000250}.

Subcellular Localization

Cytoplasm {ECO:0000250}.

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
They are also associated with 16 interaction(s) predicted by orthology.

Experimentally validated
Total	7 [view]
Protein-Protein	7 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	16 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003676	nucleic acid binding
GO:0003677	DNA binding
GO:0003723	RNA binding
GO:0044822	poly(A) RNA binding

Biological Process

GO:0006355	regulation of transcription, DNA-templated
GO:0070966	nuclear-transcribed mRNA catabolic process, no-go decay

Cellular Component

GO:0005737	cytoplasm
GO:0005743	mitochondrial inner membrane
GO:0005794	Golgi apparatus
GO:0005886	plasma membrane
GO:0070937	CRD-mediated mRNA stability complex