Version 5.4
Mus musculus Protein: Pcdh9
Summary
InnateDB Protein IDBP-183565.5
Last Modified 2012-02-14 [Report errors or provide feedback]
Gene Symbol Pcdh9
Protein Name protocadherin 9
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000070935
InnateDB Gene IDBG-183563 (Pcdh9)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
Biological Process
GO:0007156 homophilic cell adhesion
GO:0008150 biological_process
GO:0030900 forebrain development
Cellular Component
GO:0005887 integral component of plasma membrane
GO:0016020 membrane
GO:0030426 growth cone
GO:0044291 cell-cell contact zone
Protein Structure and Domains
PDB ID MGI:1306801
InterPro IPR002126 Cadherin
IPR013164 Cadherin, N-terminal
IPR013585 Protocadherin
IPR015919 Cadherin-like
PFAM PF00028
PF08266
PF08374
PRINTS PR00205
PIRSF
SMART SM00112
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-NP_001074846
TrEMBL Q8C421
UniProt Splice Variant
Entrez Gene 211712
UniGene
RefSeq NP_001074846
MGI ID
MGI Symbol Pcdh9
OMIM
CCDS CCDS36992
HPRD
IMGT
EMBL AC122355 AC123061 AC123919 AC124454 AC125095 AC132470 AC151831 AK083224
GenPept BAC38815

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca