Version 5.4
Mus musculus Protein: Nob1
Summary
InnateDB Protein IDBP-190837.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Nob1
Protein Name NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
Synonyms 1700021I09Rik; ART-4; Nob1p; Psmd8bp1;
Species Mus musculus
Ensembl Protein ENSMUSP00000003946
InnateDB Gene IDBG-190835 (Nob1)
Protein Structure
UniProt Annotation
Function May play a role in mRNA degradation. {ECO:0000250}.
Subcellular Localization Nucleus {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0046872 metal ion binding
Biological Process
GO:0007601 visual perception
GO:0030490 maturation of SSU-rRNA
GO:0042274 ribosomal small subunit biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
Protein Structure and Domains
PDB ID MGI:1914869
InterPro IPR002716 PIN domain
IPR014881 Nin one binding (NOB1) Zn-ribbon-like
IPR017117 D-site 20S pre-rRNA nuclease
PFAM PF01850
PF10130
PF13470
PF13638
PF08772
PRINTS
PIRSF PIRSF037125
SMART SM00670
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q8BW10
PhosphoSite PhosphoSite-Q8BW10
TrEMBL Q148S3
UniProt Splice Variant
Entrez Gene 67619
UniGene Mm.403649
RefSeq NP_080553
MGI ID 2CON
MGI Symbol Nob1
OMIM
CCDS CCDS22649
HPRD
IMGT
EMBL AK021194 AK075755 BC054835 BC103793 BC117992 BC117993 CH466525
GenPept AAH54835 AAI03794 AAI17993 AAI17994 BAB32325 BAC35933 EDL11408

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca