Version 5.4
Mus musculus Protein: Chtop
Summary
InnateDB Protein IDBP-266867.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Chtop
Protein Name RIKEN cDNA 2500003M10 gene
Synonyms 2500003M10Rik; Fop; Srag;
Species Mus musculus
Ensembl Protein ENSMUSP00000102967
InnateDB Gene IDBG-167607 (Chtop)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 13 experimentally validated interaction(s) in this database.
They are also associated with 8 interaction(s) predicted by orthology.
Experimentally validated
Total 13 [view]
Protein-Protein 12 [view]
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 8 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0005515 protein binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006406 mRNA export from nucleus
GO:0032781 positive regulation of ATPase activity
GO:0051096 positive regulation of helicase activity
Cellular Component
GO:0000346 transcription export complex
GO:0005730 nucleolus
GO:0016607 nuclear speck
Protein Structure and Domains
PDB ID MGI:1913761
InterPro
PFAM
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9CY57
PhosphoSite PhosphoSite-Q9CY57
TrEMBL
UniProt Splice Variant
Entrez Gene 66511
UniGene Mm.486205
RefSeq
MGI ID
MGI Symbol Chtop
OMIM
CCDS CCDS17532
HPRD
IMGT
EMBL AB041654 AK004558 AK005377 AK008885 AK010866 AK047914 AK077960 AK132769 AK149010 AK152492 BC083333 BC120651 CH466547
GenPept AAH83333 AAI20652 BAA95102 BAB23371 BAB23984 BAB25951 BAB27232 BAC33189 BAC37084 BAE21348 BAE28718 BAE31263 EDL15130

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca