Version 5.4
Homo sapiens Protein: RRP9
Summary
InnateDB Protein IDBP-37704.5
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RRP9
Protein Name ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)
Synonyms RNU3IP2; U3-55K;
Species Homo sapiens
Ensembl Protein ENSP00000232888
InnateDB Gene IDBG-37702 (RRP9)
Protein Structure
UniProt Annotation
Function Component of a nucleolar small nuclear ribonucleoprotein particle (snoRNP) thought to participate in the processing and modification of pre-ribosomal RNA.
Subcellular Localization Nucleus, nucleolus {ECO:0000269PubMed:12429849}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 19 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 19 [view]
Protein-Protein 18 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006364 rRNA processing
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005732 small nucleolar ribonucleoprotein complex
GO:0030532 small nuclear ribonucleoprotein complex
Protein Structure and Domains
PDB ID
InterPro IPR001680 WD40 repeat
IPR017986 WD40-repeat-containing domain
IPR020472 G-protein beta WD-40 repeat
PFAM PF00400
PRINTS PR00320
PIRSF
SMART SM00320
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt O43818
PhosphoSite PhosphoSite-O43818
TrEMBL
UniProt Splice Variant
Entrez Gene 9136
UniGene Hs.153768
RefSeq NP_004695
HUGO HGNC:16829
OMIM
CCDS CCDS2837
HPRD 08827
IMGT
EMBL AJ001340 AK313696 BC001113 BC009879 BC010048 BC023662 CH471055
GenPept AAH01113 AAH09879 AAH10048 AAH23662 BAG36443 CAA04687 EAW65159

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca