InnateDB: Systems Biology of the Innate Immune Response

Homo sapiens Protein: SNRNP200

Summary

InnateDB Protein

IDBP-382874.4

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

SNRNP200

Protein Name

small nuclear ribonucleoprotein 200kDa (U5)

Synonyms

ASCC3L1; BRR2; HELIC2; RP33; U5-200KD;

Species

Homo sapiens

Ensembl Protein

ENSP00000387870

InnateDB Gene

IDBG-61602 (SNRNP200)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 157 experimentally validated interaction(s) in this database.

Experimentally validated
Total	157 [view]
Protein-Protein	156 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	1 [view]
RNA-RNA	0
DNA-RNA	0

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003676	nucleic acid binding
GO:0004386	helicase activity
GO:0005524	ATP binding

Biological Process

GO:0008152

metabolic process

Cellular Component

GO:0019013	viral nucleocapsid
GO:0030529	ribonucleoprotein complex

Protein Structure and Domains

PDB ID

InterPro

IPR001650 Helicase, C-terminal
IPR004179 Sec63 domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase

PFAM

PF00271
PF02889

PRINTS

PIRSF

SMART

SM00490
SM00611
SM00973

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

PhosphoSite-

TrEMBL

B4E0P5

UniProt Splice Variant

Entrez Gene

23020

UniGene

Hs.612595

RefSeq

HUGO

HGNC:30859

OMIM

601664

CCDS

HPRD

03391

IMGT

EMBL

AC021188 AK303465

GenPept

BAG64507