InnateDB: Systems Biology of the Innate Immune Response

Homo sapiens Protein: CALCOCO2

Summary

InnateDB Protein

IDBP-484916.3

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

CALCOCO2

Protein Name

calcium binding and coiled-coil domain 2

Synonyms

NDP52;

Species

Homo sapiens

Ensembl Protein

ENSP00000424352

InnateDB Gene

IDBG-57242 (CALCOCO2)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 110 experimentally validated interaction(s) in this database.

Experimentally validated
Total	110 [view]
Protein-Protein	110 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005515	protein binding
GO:0042803	protein homodimerization activity

Biological Process

GO:0016032	viral process
GO:0034341	response to interferon-gamma
GO:0045087	innate immune response (InnateDB)

Cellular Component

GO:0005634	nucleus
GO:0005737	cytoplasm
GO:0005794	Golgi apparatus
GO:0005856	cytoskeleton
GO:0016020	membrane
GO:0043231	intracellular membrane-bounded organelle
GO:0048471	perinuclear region of cytoplasm

Protein Structure and Domains

PDB ID

InterPro

IPR012852 Coiled-coil transcriptional coactivator-like

PFAM

PF07888

PRINTS

PIRSF

SMART

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

Q13137

PhosphoSite

PhosphoSite-Q13137

TrEMBL

D6REB0

UniProt Splice Variant

Entrez Gene

10241

UniGene

Hs.624928

RefSeq

NP_001248320

HUGO

HGNC:29912

OMIM

604587

CCDS

CCDS58558

HPRD

06846

IMGT

EMBL

AC068531 AK222666 AK223227 AK293137 AK293329 AK298177 AK303313 AK314796 BC004130 BC015893 CH471109 CR456763 U22897

GenPept

AAA75297 AAH04130 AAH15893 BAD96386 BAD96947 BAG37327 BAG56685 BAG56845 BAG60448 BAG64382 CAG33044 EAW94707