InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Rnf20

Summary

InnateDB Protein

IDBP-536137.3

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Rnf20

Protein Name

ring finger protein 20

Synonyms

4833430L21Rik; AW540162; C79397; mKIAA4116;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000118293

InnateDB Gene

IDBG-147129 (Rnf20)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
They are also associated with 30 interaction(s) predicted by orthology.

Experimentally validated
Total	7 [view]
Protein-Protein	7 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	30 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0002039	p53 binding
GO:0003682	chromatin binding
GO:0003700	sequence-specific DNA binding transcription factor activity
GO:0003713	transcription coactivator activity
GO:0004842	ubiquitin-protein transferase activity
GO:0004871	signal transducer activity
GO:0005515	protein binding
GO:0031625	ubiquitin protein ligase binding
GO:0042393	histone binding

Biological Process

GO:0000209	protein polyubiquitination
GO:0006355	regulation of transcription, DNA-templated
GO:0006511	ubiquitin-dependent protein catabolic process
GO:0007165	signal transduction
GO:0010390	histone monoubiquitination
GO:0016574	histone ubiquitination
GO:0030336	negative regulation of cell migration
GO:0031062	positive regulation of histone methylation
GO:0033523	histone H2B ubiquitination
GO:0045893	positive regulation of transcription, DNA-templated

Cellular Component

GO:0005730	nucleolus
GO:0033503	HULC complex

Protein Structure and Domains

PDB ID

MGI:1925927

InterPro

IPR015988 STAT transcription factor, coiled coil

PFAM

PRINTS

PIRSF

SMART

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

PhosphoSite-

TrEMBL

A2AIR2

UniProt Splice Variant

Entrez Gene

109331

UniGene

Mm.472902

RefSeq

MGI ID

MGI Symbol

Rnf20

OMIM

CCDS

HPRD

IMGT

EMBL

AL732521

GenPept