InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Lsm14a

Summary

InnateDB Protein

IDBP-538028.3

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Lsm14a

Protein Name

LSM14 homolog A (SCD6, S. cerevisiae)

Synonyms

2700023B17Rik; AA407828; AU017544; Tral;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000119461

InnateDB Gene

IDBG-173430 (Lsm14a)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 10 interaction(s) predicted by orthology.

Experimentally validated
Total	6 [view]
Protein-Protein	6 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	10 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003690	double-stranded DNA binding
GO:0003725	double-stranded RNA binding
GO:0003727	single-stranded RNA binding

Biological Process

GO:0039529	RIG-I signaling pathway
GO:0051607	defense response to virus
GO:0060340	positive regulation of type I interferon-mediated signaling pathway

Cellular Component

GO:0000932	cytoplasmic mRNA processing body
GO:0005737	cytoplasm

Protein Structure and Domains

PDB ID

MGI:1914320

InterPro

IPR010920 Like-Sm (LSM) domain

PFAM

PRINTS

PIRSF

SMART

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

PhosphoSite-

TrEMBL

A2BH69

UniProt Splice Variant

Entrez Gene

67070

UniGene

Mm.474544

RefSeq

XP_006540366

MGI ID

MGI Symbol

Lsm14a

OMIM

CCDS

HPRD

IMGT

EMBL

BX537302 BX539342

GenPept