InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Syncrip

Summary

InnateDB Protein

IDBP-622310.2

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Syncrip

Protein Name

synaptotagmin binding, cytoplasmic RNA interacting protein

Synonyms

2610109K23Rik; 4632417O19Rik; GRY-RBP; Nsap1; Nsap1l; pp68;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000134722

InnateDB Gene

IDBG-190151 (Syncrip)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 21 experimentally validated interaction(s) in this database.
They are also associated with 109 interaction(s) predicted by orthology.

Experimentally validated
Total	21 [view]
Protein-Protein	21 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	109 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding
GO:0008143	poly(A) binding

Biological Process

GO:0017148	negative regulation of translation
GO:0070934	CRD-mediated mRNA stabilization
GO:0071346	cellular response to interferon-gamma

Cellular Component

GO:0005737	cytoplasm
GO:0070937	CRD-mediated mRNA stability complex
GO:0071013	catalytic step 2 spliceosome
GO:0097452	GAIT complex

Protein Structure and Domains

PDB ID

MGI:1891690

InterPro

IPR000504 RNA recognition motif domain
IPR006535 HnRNP R/Q splicing factor

PFAM

PF00076

PRINTS

PIRSF

SMART

SM00360

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

PhosphoSite-

TrEMBL

G3XA76

UniProt Splice Variant

Entrez Gene

56403

UniGene

Mm.415780

RefSeq

MGI ID

MGI Symbol

Syncrip

OMIM

CCDS

HPRD

IMGT

EMBL

CT025673

GenPept