InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: U2af1

Summary

InnateDB Protein

IDBP-626062.2

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

U2af1

Protein Name

U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1

Synonyms

2010107D16Rik; 35kDa;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000129864

InnateDB Gene

IDBG-164737 (U2af1)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 9 experimentally validated interaction(s) in this database.
They are also associated with 91 interaction(s) predicted by orthology.

Experimentally validated
Total	9 [view]
Protein-Protein	9 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	91 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding
GO:0003723	RNA binding
GO:0046872	metal ion binding
GO:0050733	RS domain binding

Biological Process

Cellular Component

GO:0005634

nucleus

Protein Structure and Domains

PDB ID

MGI:98884

InterPro

IPR000504 RNA recognition motif domain
IPR000571 Zinc finger, CCCH-type
IPR003954 RNA recognition motif domain, eukaryote
IPR009145 U2 auxiliary factor small subunit

PFAM

PF00076
PF00642

PRINTS

PR01848

PIRSF

SMART

SM00360
SM00356
SM00361

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt