InnateDB: Systems Biology of the Innate Immune Response

Bos taurus Protein: UBE2N

Summary

InnateDB Protein

IDBP-682319.2

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

UBE2N

Protein Name

Ubiquitin-conjugating enzyme E2 N

Synonyms

Species

Bos taurus

Ensembl Protein

ENSBTAP00000052296

InnateDB Gene

IDBG-630838 (UBE2N)

Protein Structure

UniProt Annotation

Function

The UBE2V1-UBE2N and UBE2V2-UBE2N heterodimers catalyze the synthesis of non-canonical 'Lys-63'-linked polyubiquitin chains. This type of polyubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. Plays a role in the control of progress through the cell cycle and differentiation. Plays a role in the error-free DNA repair pathway and contributes to the survival of cells after DNA damage. Acts together with the E3 ligases, HLTF and SHPRH, in the 'Lys-63'-linked poly-ubiquitination of PCNA upon genotoxic stress, which is required for DNA repair. Appears to act together with E3 ligase RNF5 in the 'Lys-63'-linked polyubiquitination of JKAMP thereby regulating JKAMP function by decreasing its association with components of the proteasome and ERAD (By similarity). Promotes TRIM5 capsid-specific restriction activity and the UBE2V1-UBE2N heterodimer acts in concert with TRIM5 to generate 'Lys-63'-linked polyubiquitin chains which activate the MAP3K7/TAK1 complex which in turn results in the induction and expression of NF-kappa-B and MAPK-responsive inflammatory genes (By similarity). {ECO:0000250}.

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 121 interaction(s) predicted by orthology.

Predicted by orthology
Total	121 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000166	nucleotide binding
GO:0004842	ubiquitin-protein transferase activity
GO:0005515	protein binding
GO:0005524	ATP binding
GO:0016874	ligase activity
GO:0016881	acid-amino acid ligase activity
GO:0043130	ubiquitin binding
GO:0044822	poly(A) RNA binding

Biological Process

GO:0000724	double-strand break repair via homologous recombination
GO:0000729	DNA double-strand break processing
GO:0006281	DNA repair
GO:0006301	postreplication repair
GO:0006511	ubiquitin-dependent protein catabolic process
GO:0006974	cellular response to DNA damage stimulus
GO:0016567	protein ubiquitination
GO:0016574	histone ubiquitination
GO:0031058	positive regulation of histone modification
GO:0033182	regulation of histone ubiquitination
GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045739	positive regulation of DNA repair
GO:0050852	T cell receptor signaling pathway
GO:0051092	positive regulation of NF-kappaB transcription factor activity
GO:0051443	positive regulation of ubiquitin-protein transferase activity
GO:0070534	protein K63-linked ubiquitination

Cellular Component

GO:0000151	ubiquitin ligase complex
GO:0005634	nucleus
GO:0031372	UBC13-MMS2 complex
GO:0035370	UBC13-UEV1A complex
GO:0043234	protein complex
GO:0070062	extracellular vesicular exosome

Protein Structure and Domains

PDB ID

InterPro

IPR000608 Ubiquitin-conjugating enzyme, E2
IPR016135 Ubiquitin-conjugating enzyme/RWD-like

PFAM

PF00179

PRINTS

PIRSF

SMART

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

Q0P5K3

PhosphoSite

PhosphoSite-

TrEMBL

UniProt Splice Variant

Entrez Gene

541130

UniGene

Bt.22061

RefSeq

NP_001069726

HUGO

OMIM

CCDS

HPRD

IMGT

EMBL

BC119931

GenPept

AAI19932