Version 5.4
Bos taurus Protein: BT.23508
Summary
InnateDB Protein IDBP-692269.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol BT.23508
Protein Name collagen alpha-1(VI) chain
Synonyms
Species Bos taurus
Ensembl Protein ENSBTAP00000015668
InnateDB Gene IDBG-640053 (BT.23508)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 7 interaction(s) predicted by orthology.
Predicted by orthology
Total 7 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0048407 platelet-derived growth factor binding
Biological Process
GO:0001649 osteoblast differentiation
GO:0070208 protein heterotrimerization
GO:0071230 cellular response to amino acid stimulus
Cellular Component
GO:0005576 extracellular region
GO:0005765 lysosomal membrane
GO:0016020 membrane
GO:0031012 extracellular matrix
GO:0042383 sarcolemma
GO:0043234 protein complex
GO:0070062 extracellular vesicular exosome
Protein Structure and Domains
PDB ID
InterPro IPR002035 von Willebrand factor, type A
IPR008160 Collagen triple helix repeat
PFAM PF00092
PF01391
PRINTS
PIRSF
SMART SM00327
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL E1BI98
UniProt Splice Variant
Entrez Gene 511422
UniGene Bt.23508
RefSeq NP_001137337
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02003502
GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca