InnateDB: Systems Biology of the Innate Immune Response

Bos taurus Protein: CHD4

Summary

InnateDB Protein

IDBP-692707.2

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

CHD4

Protein Name

Uncharacterized protein

Synonyms

Species

Bos taurus

Ensembl Protein

ENSBTAP00000019612

InnateDB Gene

IDBG-640327 (CHD4)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 88 interaction(s) predicted by orthology.

Predicted by orthology
Total	88 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000978	RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980	RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001103	RNA polymerase II repressing transcription factor binding
GO:0003676	nucleic acid binding
GO:0003677	DNA binding
GO:0004386	helicase activity
GO:0005515	protein binding
GO:0005524	ATP binding
GO:0008017	microtubule binding
GO:0008026	ATP-dependent helicase activity
GO:0008134	transcription factor binding
GO:0008270	zinc ion binding
GO:0016787	hydrolase activity
GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0031492	nucleosomal DNA binding
GO:0046872	metal ion binding

Biological Process

GO:0006200	ATP catabolic process
GO:0006325	chromatin organization
GO:0006355	regulation of transcription, DNA-templated
GO:0008152	metabolic process
GO:0043044	ATP-dependent chromatin remodeling
GO:0051225	spindle assembly

Cellular Component

GO:0000790	nuclear chromatin
GO:0005634	nucleus
GO:0005654	nucleoplasm
GO:0005737	cytoplasm
GO:0005813	centrosome
GO:0016020	membrane
GO:0016581	NuRD complex
GO:0043234	protein complex

Protein Structure and Domains

PDB ID

InterPro

IPR000330 SNF2-related
IPR000953 Chromo domain/shadow
IPR001650 Helicase, C-terminal
IPR001965 Zinc finger, PHD-type
IPR006935 Helicase/UvrB domain
IPR009462 Domain of unknown function DUF1086
IPR009463 Domain of unknown function DUF1087
IPR012957 CHD, C-terminal 2
IPR012958 CHD, N-terminal
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
IPR019787 Zinc finger, PHD-finger
IPR021006 Histone deacetylase complex, subunit 2/3
IPR023780 Chromo domain

PFAM