Version 5.4
Mus musculus Protein: Pdlim1
Summary
InnateDB Protein IDBP-788269.1
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Pdlim1
Protein Name PDZ and LIM domain 1 (elfin)
Synonyms Clim1; CLP36; mClim1;
Species Mus musculus
Ensembl Protein ENSMUSP00000138383
InnateDB Gene IDBG-164550 (Pdlim1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 11 experimentally validated interaction(s) in this database.
They are also associated with 17 interaction(s) predicted by orthology.
Experimentally validated
Total 11 [view]
Protein-Protein 11 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 17 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003713 transcription coactivator activity
GO:0005515 protein binding
Biological Process
GO:0001666 response to hypoxia
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0005667 transcription factor complex
GO:0005856 cytoskeleton
Protein Structure and Domains
PDB ID MGI:1860611
InterPro IPR001478 PDZ domain
IPR006643 ZASP
PFAM PF00595
PF13180
PRINTS
PIRSF
SMART SM00228
SM00735
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL S4R1V0
UniProt Splice Variant
Entrez Gene 54132
UniGene
RefSeq
MGI ID
MGI Symbol Pdlim1
OMIM
CCDS
HPRD
IMGT
EMBL AC170187
GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca