InnateDB Protein
|
IDBP-95180.6
|
Last Modified
|
2014-10-13 [Report errors or provide feedback]
|
Gene Symbol
|
FIG4
|
Protein Name
|
FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)
|
Synonyms
|
ALS11; BTOP; CMT4J; dJ249I4.1; KIAA0274; SAC3; YVS;
|
Species
|
Homo sapiens
|
Ensembl Protein
|
ENSP00000230124
|
InnateDB Gene
|
IDBG-95178 (FIG4)
|
Protein Structure
|
|
Function |
The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). In vitro, hydrolyzes all three D5-phosphorylated polyphosphoinositide substrates in the order PtdIns(4,5)P2 > PtdIns(3,5)P2 > PtdIns(3,4,5)P3. Plays a role in the biogenesis of endosome carrier vesicles (ECV) / multivesicular bodies (MVB) transport intermediates from early endosomes. {ECO:0000269PubMed:17556371}.
|
Subcellular Localization |
Endosome membrane {ECO:0000269PubMed:17556371}. Note=Localization requires VAC14 and PIKFYVE.
|
Disease Associations |
Charcot-Marie-Tooth disease 4J (CMT4J) [MIM:611228]: A recessive demyelinating form of Charcot-Marie-Tooth disease, a disorder of the peripheral nervous system, characterized by progressive weakness and atrophy, initially of the peroneal muscles and later of the distal muscles of the arms. Charcot- Marie-Tooth disease is classified in two main groups on the basis of electrophysiologic properties and histopathology: primary peripheral demyelinating neuropathies (designated CMT1 when they are dominantly inherited) and primary peripheral axonal neuropathies (CMT2). Demyelinating neuropathies are characterized by severely reduced nerve conduction velocities (less than 38 m/sec), segmental demyelination and remyelination with onion bulb formations on nerve biopsy, slowly progressive distal muscle atrophy and weakness, absent deep tendon reflexes, and hollow feet. By convention autosomal recessive forms of demyelinating Charcot-Marie-Tooth disease are designated CMT4. {ECO:0000269PubMed:17572665}. Note=The disease is caused by mutations affecting the gene represented in this entry.Amyotrophic lateral sclerosis 11 (ALS11) [MIM:612577]: A neurodegenerative disorder affecting upper motor neurons in the brain and lower motor neurons in the brain stem and spinal cord, resulting in fatal paralysis. Sensory abnormalities are absent. The pathologic hallmarks of the disease include pallor of the corticospinal tract due to loss of motor neurons, presence of ubiquitin-positive inclusions within surviving motor neurons, and deposition of pathologic aggregates. The etiology of amyotrophic lateral sclerosis is likely to be multifactorial, involving both genetic and environmental factors. The disease is inherited in 5- 10% of the cases. {ECO:0000269PubMed:19118816}. Note=The disease is caused by mutations affecting the gene represented in this entry.Yunis-Varon syndrome (YVS) [MIM:216340]: A severe autosomal recessive disorder characterized by skeletal defects, including cleidocranial dysplasia and digital anomalies, and severe neurologic involvement with neuronal loss. Enlarged cytoplasmic vacuoles are found in neurons, muscle, and cartilage. The disorder is usually lethal in infancy. {ECO:0000269PubMed:23623387}. Note=The disease is caused by mutations affecting the gene represented in this entry.
|
Tissue Specificity |
|
Comments |
|
Number of Interactions
|
This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
Experimentally validated |
Total |
5
[view]
|
Protein-Protein |
3
[view]
|
Protein-DNA |
1
[view]
|
Protein-RNA |
0
|
DNA-DNA |
1
[view]
|
RNA-RNA |
0
|
DNA-RNA |
0
|
|
|
|
Molecular Function |
Accession |
GO Term |
GO:0004438
|
phosphatidylinositol-3-phosphatase activity
|
GO:0005515
|
protein binding
|
GO:0034593
|
phosphatidylinositol bisphosphate phosphatase activity
|
GO:0042578
|
phosphoric ester hydrolase activity
|
GO:0043812
|
phosphatidylinositol-4-phosphate phosphatase activity
|
GO:0043813
|
phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity
|
|
Biological Process |
|
Cellular Component |
|
PDB ID |
|
InterPro |
IPR002013
Synaptojanin, N-terminal
|
PFAM |
PF02383
|
PRINTS |
|
PIRSF |
|
SMART |
|
TIGRFAMs |
|
Modification |
|
SwissProt |
Q92562
|
PhosphoSite |
PhosphoSite-Q92562
|
TrEMBL |
Q5TCS4
|
UniProt Splice Variant |
|
Entrez Gene |
9896
|
UniGene |
Hs.529959
|
RefSeq |
NP_055660
|
HUGO |
HGNC:16873
|
OMIM |
609390
|
CCDS |
CCDS5078
|
HPRD |
11073
|
IMGT |
|
EMBL |
AK222732
AL133472
AL512303
BC041338
D87464
|
GenPept |
AAH41338
BAA13403
BAD96452
CAI19669
CAI42494
|
|
|