Version 5.4
Homo sapiens Gene: SPRTN
Summary
InnateDB Gene IDBG-107422.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SPRTN
Gene Name SprT-like N-terminal domain
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000010072
Encoded Proteins
IDBP-107424
chromosome 1 open reading frame 124
IDBP-107426
chromosome 1 open reading frame 124
IDBP-107428
chromosome 1 open reading frame 124
IDBP-246843
chromosome 1 open reading frame 124
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:231337104-231355023
Strand Forward strand
Band q42.2
Transcripts
ENST00000008440 ENSP00000008440
ENST00000366644 ENSP00000355604
ENST00000295050 ENSP00000295050
ENST00000391858 ENSP00000375731
ENST00000492437
ENST00000469904
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 91 experimentally validated interaction(s) in this database.
Experimentally validated
Total 91 [view]
Protein-Protein 90 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0043130 ubiquitin binding
GO:0046872 metal ion binding
GO:0070530 K63-linked polyubiquitin binding
Biological Process
GO:0006281 DNA repair
GO:0006974 cellular response to DNA damage stimulus
GO:0009411 response to UV
GO:0019985 translesion synthesis
GO:0031398 positive regulation of protein ubiquitination
Cellular Component
GO:0005634 nucleus
GO:0005694 chromosome
GO:0016607 nuclear speck
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000031986
View Gene Order
ENSBTAG00000006112
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.608253 Hs.623990
RefSeq NM_001010984 NM_001261462 NM_032018
HUGO
OMIM
CCDS CCDS1594 CCDS31054 CCDS58066
HPRD 13164
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca