Version 5.4
Mus musculus Gene: Scaf8
Summary
InnateDB Gene IDBG-132405.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Scaf8
Gene Name SR-related CTD-associated factor 8
Synonyms A630086M08Rik; A930036P18Rik; AA408306; AI447644; AI448652; AU015035; mKIAA1116; Rbm16
Species Mus musculus
Ensembl Gene ENSMUSG00000046201
Encoded Proteins
IDBP-132409
SR-related CTD-associated factor 8
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000213079:
Gene Information
Type Protein coding
Genomic Location Chromosome 17:3114972-3198855
Strand Forward strand
Band A1
Transcripts
ENSMUST00000076734 ENSMUSP00000076024
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0043175 RNA polymerase core enzyme binding
Biological Process
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0005634 nucleus
GO:0005681 spliceosomal complex
GO:0016363 nuclear matrix
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000213079
View Gene Order
ENSBTAG00000031917
Not yet available
Cross-References
SwissProt Q6DID3
TrEMBL Q99LN2
UniProt Splice Variant
Entrez Gene 106583
UniGene Mm.124373
RefSeq NM_134123
OMIM
CCDS CCDS49927
HPRD
IMGT
MGI ID MGI:1925212
MGI Symbol Scaf8
EMBL AK032418 AK122451 AK161113 BC002302 BC038363 BC075621
GenPept AAH02302 AAH38363 AAH75621 BAC27860 BAC65733 BAE36197
RNA Seq Atlas 106583

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca