Version 5.4
Mus musculus Gene: Epdr1
Summary
InnateDB Gene IDBG-132650.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Epdr1
Gene Name ependymin related protein 1 (zebrafish)
Synonyms AU040950; AV006210; Epdm2; Epdr2; MERP-1; MERP-2; MERP2; Ucc1
Species Mus musculus
Ensembl Gene ENSMUSG00000002808
Encoded Proteins
IDBP-132652
ependymin related protein 1 (zebrafish)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000086289:
The protein encoded by this gene is a type II transmembrane protein that is similar to two families of cell adhesion molecules, the protocadherins and ependymins. This protein may play a role in calcium-dependent cell adhesion. This protein is glycosylated, and the orthologous mouse protein is localized to the lysosome. Alternative splicing results in multiple transcript variants. A related pseudogene has been identified on chromosome 8. [provided by RefSeq, Aug 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 13:19591709-19619830
Strand Reverse strand
Band A2
Transcripts
ENSMUST00000002885 ENSMUSP00000002885
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005509 calcium ion binding
Biological Process
GO:0007160 cell-matrix adhesion
GO:0008150 biological_process
Cellular Component
GO:0005576 extracellular region
GO:0005764 lysosome
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000086289
View Gene Order
ENSBTAG00000033197
Not yet available
Cross-References
SwissProt Q99M71
TrEMBL
UniProt Splice Variant
Entrez Gene 105298
UniGene Mm.275054 Mm.472102
RefSeq NM_134065
OMIM
CCDS CCDS26260
HPRD
IMGT
MGI ID MGI:2145369
MGI Symbol Epdr1
EMBL AF353717 AK034083 AK038733 AK046185 AK160413 AY028709 BC014708 DQ914440
GenPept AAH14708 AAK29146 AAK51799 ABI84107 BAC28576 BAC30113 BAC32624 BAE35778
RNA Seq Atlas 105298

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca