Version 5.4
Bos taurus Gene: EPDR1
Summary
InnateDB Gene IDBG-632680.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol EPDR1
Gene Name Mammalian ependymin-related protein 1
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000033197
Encoded Proteins
IDBP-684315
Mammalian ependymin-related protein 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000086289:
The protein encoded by this gene is a type II transmembrane protein that is similar to two families of cell adhesion molecules, the protocadherins and ependymins. This protein may play a role in calcium-dependent cell adhesion. This protein is glycosylated, and the orthologous mouse protein is localized to the lysosome. Alternative splicing results in multiple transcript variants. A related pseudogene has been identified on chromosome 8. [provided by RefSeq, Aug 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 4:50028919-50064257
Strand Forward strand
Band
Transcripts
ENSBTAT00000047158 ENSBTAP00000044382
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
Biological Process
GO:0007160 cell-matrix adhesion
Cellular Component
GO:0005576 extracellular region
GO:0005764 lysosome
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000086289
View Gene Order
ENSMUSG00000002808
View Gene Order
Cross-References
SwissProt A6QLI0
TrEMBL
UniProt Splice Variant
Entrez Gene 615376
UniGene Bt.21962
RefSeq NM_001102288
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL BC147972
GenPept AAI47973
RNA Seq Atlas 615376

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca