Version 5.4
Mus musculus Gene: Usp6nl
Summary
InnateDB Gene IDBG-135039.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Usp6nl
Gene Name USP6 N-terminal like
Synonyms AI316785; mKIAA0019; RNTRE; TRE2NL
Species Mus musculus
Ensembl Gene ENSMUSG00000039046
Encoded Proteins
IDBP-135043
USP6 N-terminal like
IDBP-250713
USP6 N-terminal like
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000148429:
Gene Information
Type Protein coding
Genomic Location Chromosome 2:6322667-6446390
Strand Forward strand
Band A1
Transcripts
ENSMUST00000042503 ENSMUSP00000043178
ENSMUST00000114937 ENSMUSP00000110587
ENSMUST00000132391
ENSMUST00000150515
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 5 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005097 Rab GTPase activator activity
Biological Process
GO:0007030 Golgi organization
GO:0032313 regulation of Rab GTPase activity
GO:0032851 positive regulation of Rab GTPase activity
GO:0035526 retrograde transport, plasma membrane to Golgi
Cellular Component
GO:0005794 Golgi apparatus
GO:0016023 cytoplasmic membrane-bounded vesicle
GO:0031410 cytoplasmic vesicle
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000148429
View Gene Order
ENSBTAG00000019488
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
NetPath_4
EGFR1 pathway
REACTOME
KEGG
INOH
PID NCI
erbb1_downstream_pathway
ErbB1 downstream signaling
pdgfrbpathway
PDGFR-beta signaling pathway
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.40673 Mm.458861 Mm.461242
RefSeq NM_001080548 NM_181399 XM_006497568 XM_006497569 XM_006497570
OMIM
CCDS CCDS38043 CCDS38044
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca