Version 5.4
Homo sapiens Gene: USP6NL
Summary
InnateDB Gene IDBG-53032.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol USP6NL
Gene Name USP6 N-terminal like
Synonyms RNTRE; TRE2NL; USP6NL-IT1
Species Homo sapiens
Ensembl Gene ENSG00000148429
Encoded Proteins
IDBP-53034
USP6 N-terminal like
IDBP-53036
USP6 N-terminal like
IDBP-813105
USP6 N-terminal like
IDBP-813108
USP6 N-terminal like
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 10:11453946-11611754
Strand Reverse strand
Band p14
Transcripts
ENST00000379237 ENSP00000368539
ENST00000277575 ENSP00000277575
ENST00000609104 ENSP00000476462
ENST00000609853 ENSP00000476748
ENST00000606752
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005097 Rab GTPase activator activity
Biological Process
GO:0007030 Golgi organization
GO:0032313 regulation of Rab GTPase activity
GO:0032851 positive regulation of Rab GTPase activity
GO:0035526 retrograde transport, plasma membrane to Golgi
Cellular Component
GO:0005794 Golgi apparatus
GO:0016023 cytoplasmic membrane-bounded vesicle
GO:0031410 cytoplasmic vesicle
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000039046
View Gene Order
ENSBTAG00000019488
Not yet available
Pathways
NETPATH
NetPath_4
EGFR1 pathway
REACTOME
KEGG
INOH
PID NCI
erbb1_downstream_pathway
ErbB1 downstream signaling
pdgfrbpathway
PDGFR-beta signaling pathway
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_001080491 NM_014688 XM_006717542
HUGO
OMIM
CCDS CCDS44357 CCDS53492
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca