Version 5.4
Mus musculus Gene: Celf2
Summary
InnateDB Gene IDBG-135132.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Celf2
Gene Name CUGBP, Elav-like family member 2
Synonyms B230218O03; B230345P09Rik; C88023; CELF-2; CUG-BP2; Cugbp2; D230046B21Rik; Etr-3; mETR-3; Napor; Napor-2
Species Mus musculus
Ensembl Gene ENSMUSG00000002107
Encoded Proteins
IDBP-135134
CUGBP, Elav-like family member 2
IDBP-135136
CUGBP, Elav-like family member 2
IDBP-250723
CUGBP, Elav-like family member 2
IDBP-250727
CUGBP, Elav-like family member 2
IDBP-250729
CUGBP, Elav-like family member 2
IDBP-250731
CUGBP, Elav-like family member 2
IDBP-535563
CUGBP, Elav-like family member 2
IDBP-789950
CUGBP, Elav-like family member 2
IDBP-789956
CUGBP, Elav-like family member 2
IDBP-789955
CUGBP, Elav-like family member 2
IDBP-623456
CUGBP, Elav-like family member 2
IDBP-789946
CUGBP, Elav-like family member 2
IDBP-789947
CUGBP, Elav-like family member 2
IDBP-789948
CUGBP, Elav-like family member 2
IDBP-789949
CUGBP, Elav-like family member 2
IDBP-789951
CUGBP, Elav-like family member 2
IDBP-789952
CUGBP, Elav-like family member 2
IDBP-789953
CUGBP, Elav-like family member 2
IDBP-789958
CUGBP, Elav-like family member 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000048740:
Members of the CELF/BRUNOL protein family contain two N-terminal RNA recognition motif (RRM) domains, one C-terminal RRM domain, and a divergent segment of 160-230 aa between the second and third RRM domains. Members of this protein family regulate pre-mRNA alternative splicing and may also be involved in mRNA editing, and translation. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:6539694-7509563
Strand Reverse strand
Band A1
Transcripts
ENSMUST00000100429 ENSMUSP00000097996
ENSMUST00000002176 ENSMUSP00000002176
ENSMUST00000114934 ENSMUSP00000110584
ENSMUST00000114927 ENSMUSP00000110577
ENSMUST00000114924 ENSMUSP00000110574
ENSMUST00000114923 ENSMUSP00000110573
ENSMUST00000142941 ENSMUSP00000120459
ENSMUST00000150624 ENSMUSP00000138297
ENSMUST00000138347
ENSMUST00000148321
ENSMUST00000126742
ENSMUST00000123142 ENSMUSP00000138666
ENSMUST00000137733 ENSMUSP00000138694
ENSMUST00000170438 ENSMUSP00000130829
ENSMUST00000183209 ENSMUSP00000138355
ENSMUST00000182851 ENSMUSP00000138363
ENSMUST00000182879 ENSMUSP00000138359
ENSMUST00000182706 ENSMUSP00000138764
ENSMUST00000183091 ENSMUSP00000138795
ENSMUST00000183984 ENSMUSP00000138974
ENSMUST00000182355
ENSMUST00000182404 ENSMUSP00000138769
ENSMUST00000183269
ENSMUST00000182560
ENSMUST00000182523
ENSMUST00000182657 ENSMUSP00000138785
ENSMUST00000182749
ENSMUST00000182037
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
Biological Process
GO:0006376 mRNA splice site selection
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Gene ID
Gene Order
ENSG00000048740
View Gene Order
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.397528 Mm.397940 Mm.398543 Mm.473878 Mm.473951 Mm.473989
RefSeq NM_001110228 NM_001110229 NM_001110230 NM_001110231 NM_001110232 NM_001160292 NM_001160293 NM_010160 XM_006497331 XM_006497340 XM_006497343 XM_006497345 XM_006497346 XM_006497347 XM_006497348 XM_006497349 XM_006497350 XM_006497351
OMIM
CCDS CCDS50491 CCDS50492 CCDS50493 CCDS50494 CCDS59632 CCDS59633
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca