Version 5.4
Mus musculus Gene: Ccdc39
Summary
InnateDB Gene IDBG-137594.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ccdc39
Gene Name coiled-coil domain containing 39
Synonyms 4921507O14Rik; AI447426; AI844750; b2b1304Clo; b2b1735Clo; b2b2025.1Clo; D3Ertd789e
Species Mus musculus
Ensembl Gene ENSMUSG00000027676
Encoded Proteins
IDBP-137596
coiled-coil domain containing 39
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000145075:
The protein encoded by this gene is involved in the motility of cilia and flagella. The encoded protein is essential for the assembly of dynein regulatory and inner dynein arm complexes, which regulate ciliary beat. Defects in this gene are a cause of primary ciliary dyskinesia type 14 (CILD14). [provided by RefSeq, Jul 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:33812362-33844310
Strand Reverse strand
Band A3
Transcripts
ENSMUST00000029222 ENSMUSP00000029222
ENSMUST00000125845
ENSMUST00000127844
ENSMUST00000154577
ENSMUST00000135728
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
Biological Process
GO:0001947 heart looping
GO:0030324 lung development
GO:0035469 determination of pancreatic left/right asymmetry
GO:0060285 cilium-dependent cell motility
GO:0060287 epithelial cilium movement involved in determination of left/right asymmetry
GO:0070286 axonemal dynein complex assembly
GO:0071907 determination of digestive tract left/right asymmetry
GO:0071910 determination of liver left/right asymmetry
Cellular Component
GO:0005856 cytoskeleton
GO:0005930 axoneme
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000145075
View Gene Order
ENSBTAG00000001969
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.447831 Mm.474546
RefSeq NM_026222 XM_006535498 XM_006535500 XM_006535501 XM_006535502
OMIM
CCDS CCDS17304
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca