Version 5.4
Mus musculus Gene: Sntb1
Summary
InnateDB Gene IDBG-141842.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Sntb1
Gene Name syntrophin, basic 1
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000060429
Encoded Proteins
IDBP-141844
syntrophin, basic 1
IDBP-260779
syntrophin, basic 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000172164:
Dystrophin is a large, rod-like cytoskeletal protein found at the inner surface of muscle fibers. Dystrophin is missing in Duchenne Muscular Dystrophy patients and is present in reduced amounts in Becker Muscular Dystrophy patients. The protein encoded by this gene is a peripheral membrane protein found associated with dystrophin and dystrophin-related proteins. This gene is a member of the syntrophin gene family, which contains at least two other structurally-related genes. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 15:55638843-55906949
Strand Reverse strand
Band D1
Transcripts
ENSMUST00000039769 ENSMUSP00000041294
ENSMUST00000110200 ENSMUSP00000105829
ENSMUST00000140574
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 7 interaction(s) predicted by orthology.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 7 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003779 actin binding
GO:0005515 protein binding
GO:0005516 calmodulin binding
GO:0030165 PDZ domain binding
Biological Process
Cellular Component
GO:0005737 cytoplasm
GO:0005856 cytoskeleton
GO:0030054 cell junction
GO:0042383 sarcolemma
GO:0043234 protein complex
GO:0045202 synapse
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000172164
View Gene Order
ENSBTAG00000044126
Not yet available
Cross-References
SwissProt Q99L88
TrEMBL
UniProt Splice Variant
Entrez Gene 20649
UniGene Mm.309425
RefSeq NM_016667 XM_006520671
OMIM
CCDS CCDS27479
HPRD
IMGT
MGI ID MGI:101781
MGI Symbol Sntb1
EMBL BC003748 U89997
GenPept AAB66697 AAH03748
RNA Seq Atlas 20649

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca