Version 5.4
Mus musculus Gene: Crx
Summary
InnateDB Gene IDBG-145514.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Crx
Gene Name cone-rod homeobox containing gene
Synonyms Crx1
Species Mus musculus
Ensembl Gene ENSMUSG00000041578
Encoded Proteins
IDBP-145516
cone-rod homeobox containing gene
IDBP-622157
cone-rod homeobox containing gene
IDBP-622150
cone-rod homeobox containing gene
IDBP-622155
cone-rod homeobox containing gene
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 7:15865947-15879968
Strand Reverse strand
Band A2
Transcripts
ENSMUST00000044434 ENSMUSP00000043436
ENSMUST00000132563 ENSMUSP00000133833
ENSMUST00000174318 ENSMUSP00000134400
ENSMUST00000174358
ENSMUST00000172758 ENSMUSP00000134463
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0035257 nuclear hormone receptor binding
GO:0043522 leucine zipper domain binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0007275 multicellular organismal development
GO:0007601 visual perception
GO:0007623 circadian rhythm
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0046534 positive regulation of photoreceptor cell differentiation
GO:0050896 response to stimulus
GO:0060041 retina development in camera-type eye
Cellular Component
GO:0005634 nucleus
GO:0005667 transcription factor complex
Orthologs
No orthologs found for this gene
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.404849 Mm.441911
RefSeq NM_001113330 NM_007770
OMIM
CCDS CCDS20840 CCDS52035
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca