Version 5.4
Mus musculus Gene: Apobec3
Summary
InnateDB Gene IDBG-163088.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Apobec3
Gene Name apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
Synonyms Arp3; BC003314; Cem15; Rfv3
Species Mus musculus
Ensembl Gene ENSMUSG00000009585
Encoded Proteins
IDBP-163092
apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
IDBP-262010
apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
IDBP-621419
apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
IDBP-743798
IDBP-744126
IDBP-743764
IDBP-743900
IDBP-743864
IDBP-743733
IDBP-744067
IDBP-744025
IDBP-743958
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 15:79891659-79915906
Strand Forward strand
Band E1
Transcripts
ENSMUST00000023054 ENSMUSP00000023054
ENSMUST00000109620 ENSMUSP00000105249
ENSMUST00000165537 ENSMUSP00000132391
ENSMUST00000177006 ENSMUSP00000135507
ENSMUST00000176868 ENSMUSP00000135706
ENSMUST00000176823
ENSMUST00000175714 ENSMUSP00000135027
ENSMUST00000177483 ENSMUSP00000135011
ENSMUST00000177350 ENSMUSP00000134938
ENSMUST00000176644
ENSMUST00000175752 ENSMUSP00000135358
ENSMUST00000176325 ENSMUSP00000134838
ENSMUST00000175827
ENSMUST00000177098 ENSMUSP00000135079
ENSMUST00000175849
ENSMUST00000176904 ENSMUSP00000135502
ENSMUST00000175801
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003824 catalytic activity
GO:0004126 cytidine deaminase activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
Biological Process
GO:0002244 hematopoietic progenitor cell differentiation
GO:0008152 metabolic process
GO:0009972 cytidine deamination
GO:0010529 negative regulation of transposition
GO:0045071 negative regulation of viral genome replication
GO:0045087 innate immune response
GO:0045869 negative regulation of single stranded viral RNA replication via double stranded DNA intermediate
GO:0048525 negative regulation of viral process
GO:0051607 defense response to virus
GO:0070383 DNA cytosine deamination
Cellular Component
GO:0000932 cytoplasmic mRNA processing body
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
No orthologs found for this gene
Cross-References
SwissProt
TrEMBL C3UP59 G3KG22 H3BJ44 H3BJD1 H3BKS1
UniProt Splice Variant
Entrez Gene 80287
UniGene Mm.428054
RefSeq NM_001160415 NM_030255 XM_006521550 XM_006521551 XM_006521552
OMIM
CCDS CCDS27654 CCDS49669
HPRD
IMGT
MGI ID MGI:1933111
MGI Symbol Apobec3
EMBL AC113595 FJ602382 JN227717
GenPept ACP19551 AEM61124
RNA Seq Atlas 80287

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca