Version 5.4
Mus musculus Gene: Lsm11
Summary
InnateDB Gene IDBG-164855.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Lsm11
Gene Name U7 snRNP-specific Sm-like protein LSM11
Synonyms 2210404M20Rik; AV079530
Species Mus musculus
Ensembl Gene ENSMUSG00000044847
Encoded Proteins
IDBP-164857
U7 snRNP-specific Sm-like protein LSM11
IDBP-539751
U7 snRNP-specific Sm-like protein LSM11
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000155858:
Gene Information
Type Protein coding
Genomic Location Chromosome 11:45928269-45944935
Strand Reverse strand
Band B1.1
Transcripts
ENSMUST00000062458 ENSMUSP00000057343
ENSMUST00000129820 ENSMUSP00000117531
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0071209 U7 snRNA binding
Biological Process
GO:0000084 mitotic S phase
GO:0006398 histone mRNA 3'-end processing
Cellular Component
GO:0005634 nucleus
GO:0005683 U7 snRNP
GO:0071204 histone pre-mRNA 3'end processing complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000155858
View Gene Order
ENSBTAG00000010363
Not yet available
Pathways
NETPATH
REACTOME
REACT_215668
SLBP independent Processing of Histone Pre-mRNAs pathway
REACT_248407
Processing of Capped Intronless Pre-mRNA pathway
REACT_257346
RNA Polymerase II Transcription Termination pathway
REACT_253727
Cleavage of Growing Transcript in the Termination Region pathway
REACT_233572
Gene Expression pathway
REACT_235695
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs pathway
REACT_242255
RNA Polymerase II Transcription pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_185
SLBP independent Processing of Histone Pre-mRNAs pathway
REACT_1364
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs pathway
REACT_387
Cleavage of Growing Transcript in the Termination Region pathway
REACT_894
RNA Polymerase II Transcription Termination pathway
REACT_1366
RNA Polymerase II Transcription pathway
REACT_1768
Processing of Capped Intronless Pre-mRNA pathway
REACT_71
Gene Expression pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt Q8BUV6
TrEMBL Q5SUH5 Q9CVB3
UniProt Splice Variant
Entrez Gene 72290
UniGene Mm.249827 Mm.433922 Mm.455600
RefSeq NM_028185
OMIM
CCDS CCDS36131
HPRD
IMGT
MGI ID MGI:1919540
MGI Symbol Lsm11
EMBL AF514309 AK008830 AK082292 AK143661 BC094286 CH466575
GenPept AAH94286 AAQ08118 BAB25917 BAC38456 BAE25483 EDL33832
RNA Seq Atlas 72290

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca