Version 5.4
Mus musculus Gene: Pcbp3
Summary
InnateDB Gene IDBG-166344.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Pcbp3
Gene Name poly(rC) binding protein 3
Synonyms AlphaCP-3
Species Mus musculus
Ensembl Gene ENSMUSG00000001120
Encoded Proteins
IDBP-166346
poly(rC) binding protein 3
IDBP-166348
poly(rC) binding protein 3
IDBP-270935
poly(rC) binding protein 3
IDBP-627392
poly(rC) binding protein 3
IDBP-627397
poly(rC) binding protein 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000183570:
This gene encodes a member of the KH-domain protein subfamily. Proteins of this subfamily, also referred to as alpha-CPs, bind to RNA with a specificity for C-rich pyrimidine regions. Alpha-CPs play important roles in post-transcriptional activities and have different cellular distributions. This gene's protein is found in the cytoplasm, yet it lacks the nuclear localization signals found in other subfamily members. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 10:76761857-76961887
Strand Reverse strand
Band C1
Transcripts
ENSMUST00000001148 ENSMUSP00000001148
ENSMUST00000092393 ENSMUSP00000090048
ENSMUST00000105411 ENSMUSP00000101051
ENSMUST00000168505
ENSMUST00000168240
ENSMUST00000173854 ENSMUSP00000134144
ENSMUST00000171437
ENSMUST00000165571
ENSMUST00000168465 ENSMUSP00000129465
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 13 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 13 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0044822 poly(A) RNA binding
Biological Process
Cellular Component
GO:0005634 nucleus
GO:0005739 mitochondrion
GO:0005829 cytosol
GO:0030529 ribonucleoprotein complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000183570
View Gene Order
ENSBTAG00000030775
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.402064 Mm.486822
RefSeq NM_021568 XM_006513923
OMIM
CCDS CCDS35946
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca