Version 5.4
Mus musculus Gene: Vps52
Summary
InnateDB Gene IDBG-168605.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Vps52
Gene Name vacuolar protein sorting 52 (yeast)
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000024319
Encoded Proteins
IDBP-168607
vacuolar protein sorting 52 (yeast)
IDBP-626819
vacuolar protein sorting 52 (yeast)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000223501:
This gene encodes a protein that is similar to the yeast suppressor of actin mutations 2 gene. The yeast protein forms a subunit of the tetrameric Golgi-associated retrograde protein complex that is involved in vesicle trafficking from from both early and late endosomes, back to the trans-Golgi network. This gene is located on chromosome 6 in a head-to-head orientation with the gene encoding ribosomal protein S18. [provided by RefSeq, Jul 2008]
This gene encodes a protein that is similar to the yeast suppressor of actin mutations 2 gene. The yeast protein forms a subunit of the tetrameric Golgi-associated retrograde protein complex that is involved in vesicle trafficking from from both early and late endosomes, back to the trans-Golgi network. This gene is located on chromosome 6 in a head-to-head orientation with the gene encoding ribosomal protein S18. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2014]
Gene Information
Type Protein coding
Genomic Location Chromosome 17:33955812-33966984
Strand Forward strand
Band B1
Transcripts
ENSMUST00000025178 ENSMUSP00000025178
ENSMUST00000173196 ENSMUSP00000133926
ENSMUST00000173318
ENSMUST00000173445
ENSMUST00000172558
ENSMUST00000174588
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 8 interaction(s) predicted by orthology.
Predicted by orthology
Total 8 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0010668 ectodermal cell differentiation
GO:0015031 protein transport
GO:0048611 embryonic ectodermal digestive tract development
Cellular Component
GO:0005575 cellular_component
GO:0005794 Golgi apparatus
GO:0010008 endosome membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000223501
View Gene Order
ENSBTAG00000002643
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.448614 Mm.485758
RefSeq NM_172620 XM_006524107 XM_006524108 XM_006525357 XM_006525358
OMIM
CCDS CCDS37574
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca