Version 5.4
Mus musculus Gene: Setd3
Summary
InnateDB Gene IDBG-170285.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Setd3
Gene Name SET domain containing 3
Synonyms 2610102I01Rik; 2610305M23Rik; 6030490B17Rik; D12Ertd771e
Species Mus musculus
Ensembl Gene ENSMUSG00000056770
Encoded Proteins
IDBP-170289
SET domain containing 3
IDBP-261445
SET domain containing 3
IDBP-538002
SET domain containing 3
IDBP-536380
SET domain containing 3
IDBP-534955
SET domain containing 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000183576:
Gene Information
Type Protein coding
Genomic Location Chromosome 12:108106431-108179314
Strand Reverse strand
Band F1
Transcripts
ENSMUST00000071095 ENSMUSP00000066413
ENSMUST00000109879 ENSMUSP00000105505
ENSMUST00000148119
ENSMUST00000132682 ENSMUSP00000123159
ENSMUST00000125210
ENSMUST00000147466 ENSMUSP00000121406
ENSMUST00000125916 ENSMUSP00000122520
ENSMUST00000169951
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 7 interaction(s) predicted by orthology.
Predicted by orthology
Total 7 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0001102 RNA polymerase II activating transcription factor binding
GO:0003713 transcription coactivator activity
GO:0005515 protein binding
GO:0042800 histone methyltransferase activity (H3-K4 specific)
GO:0046975 histone methyltransferase activity (H3-K36 specific)
Biological Process
GO:0006351 transcription, DNA-templated
GO:0010452 histone H3-K36 methylation
GO:0018022 peptidyl-lysine methylation
GO:0018023 peptidyl-lysine trimethylation
GO:0018026 peptidyl-lysine monomethylation
GO:0018027 peptidyl-lysine dimethylation
GO:0045893 positive regulation of transcription, DNA-templated
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0051149 positive regulation of muscle cell differentiation
GO:0051568 histone H3-K4 methylation
Cellular Component
GO:0000790 nuclear chromatin
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000183576
View Gene Order
ENSBTAG00000018310
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.159185 Mm.325564 Mm.472969
RefSeq NM_028262 XM_006516079 XM_006516080 XM_006516082 XM_006516083
OMIM
CCDS CCDS26159
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca