Version 5.4
Mus musculus Gene: Hormad1
Summary
InnateDB Gene IDBG-172927.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Hormad1
Gene Name HORMA domain containing 1
Synonyms 4921522K05Rik; Nohma
Species Mus musculus
Ensembl Gene ENSMUSG00000028109
Encoded Proteins
IDBP-172929
HORMA domain containing 1
IDBP-172931
HORMA domain containing 1
IDBP-267269
HORMA domain containing 1
IDBP-623326
HORMA domain containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000143452:
This gene encodes a HORMA domain-containing protein. HORMA domains are involved in chromatin binding and play a role in cell cycle regulation. The encoded protein may play a role in meiosis, and expression of this gene is a potential marker for cancer. A pseudogene of this gene is located on the long arm of chromosome 6. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Dec 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:95559677-95587671
Strand Forward strand
Band F2.1
Transcripts
ENSMUST00000090797 ENSMUSP00000088303
ENSMUST00000029754 ENSMUSP00000029754
ENSMUST00000107154 ENSMUSP00000102772
ENSMUST00000128291
ENSMUST00000171191 ENSMUSP00000127180
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0001824 blastocyst development
GO:0007126 meiotic nuclear division
GO:0007130 synaptonemal complex assembly
GO:0007283 spermatogenesis
GO:0042138 meiotic DNA double-strand break formation
GO:0048477 oogenesis
GO:0051177 meiotic sister chromatid cohesion
GO:0051598 meiotic recombination checkpoint
GO:0060629 regulation of homologous chromosome segregation
Cellular Component
GO:0000794 condensed nuclear chromosome
GO:0005634 nucleus
GO:0005694 chromosome
GO:0005737 cytoplasm
GO:0045111 intermediate filament cytoskeleton
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000143452
View Gene Order
ENSBTAG00000002724
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.179050 Mm.390787 Mm.399182
RefSeq NM_001289532 NM_001289534 NM_026489 XM_006501954 XM_006501955 XM_006501957
OMIM
CCDS CCDS38547 CCDS71292
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca