Version 5.4
Mus musculus Gene: Pop4
Summary
InnateDB Gene IDBG-175622.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Pop4
Gene Name processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)
Synonyms 1110023P21Rik; Rpp29
Species Mus musculus
Ensembl Gene ENSMUSG00000030423
Encoded Proteins
IDBP-175624
processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000105171:
This gene encodes one of the protein subunits of the small nucleolar ribonucleoprotein complexes: the endoribonuclease for mitochondrial RNA processing complex and the ribonuclease P complex. The encoded protein is localized to the nucleus and associates directly with the RNA component of these complexes. This protein is involved in processing of precursor RNAs. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 7:38262820-38271348
Strand Reverse strand
Band B3
Transcripts
ENSMUST00000032585 ENSMUSP00000032585
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0004526 ribonuclease P activity
GO:0004540 ribonuclease activity
GO:0005515 protein binding
Biological Process
GO:0006364 rRNA processing
GO:0006379 mRNA cleavage
GO:0008033 tRNA processing
GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
Cellular Component
GO:0000172 ribonuclease MRP complex
GO:0005655 nucleolar ribonuclease P complex
GO:0030677 ribonuclease P complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000105171
View Gene Order
ENSBTAG00000002223
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu03013
RNA transport pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa03013
RNA transport pathway
INOH
PID NCI
Cross-References
SwissProt Q9CR08
TrEMBL
UniProt Splice Variant
Entrez Gene 66161
UniGene Mm.22284 Mm.406016
RefSeq NM_025390 XM_006540286
OMIM
CCDS CCDS39915
HPRD
IMGT
MGI ID MGI:1913411
MGI Symbol Pop4
EMBL AK002855 AK003293 AK150459 AK152948 BC011465
GenPept AAH11465 BAB22410 BAB22696 BAE29579 BAE31617
RNA Seq Atlas 66161

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca