Version 5.4
Mus musculus Gene: Ttc3
Summary
InnateDB Gene IDBG-178662.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ttc3
Gene Name tetratricopeptide repeat domain 3
Synonyms 2610202A04Rik; AA409221; D16Ium21; D16Ium21e; mKIAA4119; TPRD
Species Mus musculus
Ensembl Gene ENSMUSG00000040785
Encoded Proteins
IDBP-400803
tetratricopeptide repeat domain 3
IDBP-400801
tetratricopeptide repeat domain 3
IDBP-534884
tetratricopeptide repeat domain 3
IDBP-534175
tetratricopeptide repeat domain 3
IDBP-533650
tetratricopeptide repeat domain 3
IDBP-536085
tetratricopeptide repeat domain 3
IDBP-534218
tetratricopeptide repeat domain 3
IDBP-540219
tetratricopeptide repeat domain 3
IDBP-539379
tetratricopeptide repeat domain 3
IDBP-539011
tetratricopeptide repeat domain 3
IDBP-542361
tetratricopeptide repeat domain 3
IDBP-534877
tetratricopeptide repeat domain 3
IDBP-533166
tetratricopeptide repeat domain 3
IDBP-538925
tetratricopeptide repeat domain 3
IDBP-531669
tetratricopeptide repeat domain 3
IDBP-533136
tetratricopeptide repeat domain 3
IDBP-538891
tetratricopeptide repeat domain 3
IDBP-538943
tetratricopeptide repeat domain 3
IDBP-534136
tetratricopeptide repeat domain 3
IDBP-531743
tetratricopeptide repeat domain 3
IDBP-541159
tetratricopeptide repeat domain 3
IDBP-533828
tetratricopeptide repeat domain 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000182670:
Gene Information
Type Protein coding
Genomic Location Chromosome 16:94370618-94469222
Strand Forward strand
Band C4
Transcripts
ENSMUST00000117648 ENSMUSP00000112801
ENSMUST00000119131 ENSMUSP00000113311
ENSMUST00000147352 ENSMUSP00000116097
ENSMUST00000150346 ENSMUSP00000122726
ENSMUST00000149753
ENSMUST00000155692 ENSMUSP00000122724
ENSMUST00000153988 ENSMUSP00000118763
ENSMUST00000145432 ENSMUSP00000121501
ENSMUST00000141856 ENSMUSP00000117369
ENSMUST00000130960
ENSMUST00000139513 ENSMUSP00000117881
ENSMUST00000143145 ENSMUSP00000122650
ENSMUST00000152117 ENSMUSP00000116896
ENSMUST00000153062 ENSMUSP00000115389
ENSMUST00000154243 ENSMUSP00000122439
ENSMUST00000127911
ENSMUST00000150097 ENSMUSP00000119035
ENSMUST00000122895 ENSMUSP00000123037
ENSMUST00000151770 ENSMUSP00000121349
ENSMUST00000147046 ENSMUSP00000119265
ENSMUST00000127667 ENSMUSP00000122425
ENSMUST00000149885 ENSMUSP00000122006
ENSMUST00000151192
ENSMUST00000145883 ENSMUSP00000123442
ENSMUST00000141176 ENSMUSP00000114483
ENSMUST00000139607
ENSMUST00000141192 ENSMUSP00000117530
ENSMUST00000154196
ENSMUST00000131429
ENSMUST00000129536
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 10 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 4 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 10 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004842 ubiquitin-protein transferase activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0016874 ligase activity
GO:0046872 metal ion binding
Biological Process
GO:0006511 ubiquitin-dependent protein catabolic process
GO:0010771 negative regulation of cell morphogenesis involved in differentiation
GO:0045665 negative regulation of neuron differentiation
GO:0070936 protein K48-linked ubiquitination
Cellular Component
GO:0005634 nucleus
GO:0005739 mitochondrion
GO:0005773 vacuole
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000182670
View Gene Order
ENSBTAG00000008167
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.213408 Mm.468064
RefSeq NM_009441 XM_006522984 XM_006522985 XM_006522986 XM_006522987 XM_006522988 XM_006522989 XM_006522990 XM_006522991 XM_006522992 XM_006522993 XM_006522994 XM_006522995 XM_006522996 XM_006522997 XM_006522999 XM_006523000 XM_006523194
OMIM
CCDS CCDS37407
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca